Details for DataSet_104
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM2578856 | case | Homo sapiens | HOXA5,KLF4,BACH2 | Bisulfite_seq | GGGCTGTCGCTGCCGGGCGAG,GGGTGGGACGCGCCGGAACGA,GAATGTAGCGATTGAGAGTGT | 3 | chr7:27143264:+,chr9:107489104:-,chr6:90296883:- | 28923089 | GSE97816 | HEK293T | cell line | |
| GSM2578857 | case | Homo sapiens | HOXA5,KLF4,BACH2 | Bisulfite_seq | GGGCTGTCGCTGCCGGGCGAG,GGGTGGGACGCGCCGGAACGA,GAATGTAGCGATTGAGAGTGT | 3 | chr7:27143264:+,chr9:107489104:-,chr6:90296883:- | 28923089 | GSE97816 | HEK293T | cell line | |
| GSM2578858 | case | Homo sapiens | HOXA5,KLF4,BACH2 | Bisulfite_seq | GGGCTGTCGCTGCCGGGCGAG,GGGTGGGACGCGCCGGAACGA,GAATGTAGCGATTGAGAGTGT | 3 | chr7:27143264:+,chr9:107489104:-,chr6:90296883:- | 28923089 | GSE97816 | HEK293T | cell line | |
| GSM2578849 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28923089 | GSE97816 | HEK293T | cell line | DC group |
| GSM2578850 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28923089 | GSE97816 | HEK293T | cell line | DC group |
| GSM2578851 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28923089 | GSE97816 | HEK293T | cell line | DC group |
| GSM2578852 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 28923089 | GSE97816 | HEK293T | cell line | DC group |
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Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
