Details for DataSet_13


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM1834118caseDrosophila melanogasterSnailRNA_seqCCGACGCCGCTGTCGCCATTTGG,TCCATTTCCCACCTCTCTCTCGG,AAAGTGCTGTTGTTGTTGCTAGG,GAAATACGCAATAAGGGTATGGG,GAGAGAGAGAGTGAGAGAGCAGG5NT_033779.5:15478402:-,NT_033779.5:15478440:-,NT_033779.5:15478306:+,NT_033779.5:15478473:+,NT_033779.5:15478378:-26245833GSE71430S2R+ cellscell line
GSM1834119caseDrosophila melanogasterSnailRNA_seqCCGACGCCGCTGTCGCCATTTGG,TCCATTTCCCACCTCTCTCTCGG,AAAGTGCTGTTGTTGTTGCTAGG,GAAATACGCAATAAGGGTATGGG,GAGAGAGAGAGTGAGAGAGCAGG5NT_033779.5:15478402:-,NT_033779.5:15478440:-,NT_033779.5:15478306:+,NT_033779.5:15478473:+,NT_033779.5:15478378:-26245833GSE71430S2R+ cellscell line
GSM1834124controlDrosophila melanogasterQuasRNA_seqCTCGGGTAATCGCTTATCCTCGG,CGGATAAACAATTATCCTCACGG,CCAACGCGTTGGGAGCTCTCCGG3NA,NA,NA26245833GSE71430S2R+ cellscell line
GSM1834125controlDrosophila melanogasterQuasRNA_seqCTCGGGTAATCGCTTATCCTCGG,CGGATAAACAATTATCCTCACGG,CCAACGCGTTGGGAGCTCTCCGG3NA,NA,NA26245833GSE71430S2R+ cellscell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes