Details for DataSet_15

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM1834122caseDrosophila melanogasterSnail,TwistRNA_seqGCGTTAACTCTCCCCGACGTCGG,AACTGTCACGGTGGAAAGAGAGG,GGCGAGATCCCACAAGTAGCTGG,AGCGAAAATCGATCAGTGTAAGG,GCTCACTCACTCCTATTAGCTGG5NT_033778.4:11528094:-,NT_033778.4:11528161:+,NT_033778.4:11527904:-,NT_033778.4:11527939:+,NT_033778.4:11527982:+26245833GSE71430S2R+ cellscell line
GSM1834123caseDrosophila melanogasterSnail,TwistRNA_seqGCGTTAACTCTCCCCGACGTCGG,AACTGTCACGGTGGAAAGAGAGG,GGCGAGATCCCACAAGTAGCTGG,AGCGAAAATCGATCAGTGTAAGG,GCTCACTCACTCCTATTAGCTGG5NT_033778.4:11528094:-,NT_033778.4:11528161:+,NT_033778.4:11527904:-,NT_033778.4:11527939:+,NT_033778.4:11527982:+26245833GSE71430S2R+ cellscell line
GSM1834124controlDrosophila melanogasterQuasRNA_seqCTCGGGTAATCGCTTATCCTCGG,CGGATAAACAATTATCCTCACGG,CCAACGCGTTGGGAGCTCTCCGG3NA,NA,NA26245833GSE71430S2R+ cellscell line
GSM1834125controlDrosophila melanogasterQuasRNA_seqCTCGGGTAATCGCTTATCCTCGG,CGGATAAACAATTATCCTCACGG,CCAACGCGTTGGGAGCTCTCCGG3NA,NA,NA26245833GSE71430S2R+ cellscell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes