CRISPRepi

Details for DataSet_183

Sample info of the DataSet

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Sample_accession	Sample_group	Organism	Target_gene	Data_type	sgRNA	sgRNA_Number_perVector	sgRNA_coordinate	PubMed	Data_accession	Cell_type	Sample_Type	Notes
GSM2872378	case	Homo sapiens	SHB	Bisulfite_seq	CTGTGTGCTAAACCTCCCGTTGG	1	chr9:38017561:-	29907613	GSE107607	HeLa	cell line
GSM2872380	case	Homo sapiens	SHB	Bisulfite_seq	CTGTGTGCTAAACCTCCCGTTGG	1	chr9:38017561:-	29907613	GSE107607	HeLa	cell line
GSM2872382	case	Homo sapiens	SHB	Bisulfite_seq	CTGTGTGCTAAACCTCCCGTTGG	1	chr9:38017561:-	29907613	GSE107607	HeLa	cell line
GSM2872377	control	Homo sapiens	NA	Bisulfite_seq	NA	0	NA	29907613	GSE107607	HeLa	cell line
GSM2872379	control	Homo sapiens	NA	Bisulfite_seq	NA	0	NA	29907613	GSE107607	HeLa	cell line
GSM2872381	control	Homo sapiens	NA	Bisulfite_seq	NA	0	NA	29907613	GSE107607	HeLa	cell line

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Differentially methylated regions and off-target assessment

Differentially methylated regions

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Off-target assessment

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Methylation profile

GSM2872378

GSM2872380

GSM2872382

GSM2872377

GSM2872379

GSM2872381