ERS2006754 | case | Homo sapiens | OCT4,SOX2,KLF4,MYC,LIN28A,EEA-motif | RNA_seq | GGGGGAGAAACTGAGGCGA,GGCACAGTGCCAGAGGTCTG,TCTGTGGGGGACCTGCACTG,GTGGCTGGCAGGCTGGCTCT,CAAAACCCGGCAGCGAGGCT,GCTGCCATAGCAACGATGGA,CCCTTTATAATGCGAGGGTC,GTGTCAGAGACCGGAGTTGT,CGGGGTACTCAAGTCTTCTA,TAATTATCTGCCCGGGGGGT,CCCAGCACTTTGGG,AATCCCAGCACTTT,GCCTCCCAAAGTGC,GCTACTTGGGAGGC,GCCTCCCAAGTAGC,CGAACGTGTCTGCGGGCGCG,TATAAGTAAGGAACGCGCGC,GCTGCCATAGCAACGATGGA,GTTCGGTCGCTGCGCGACCA,TCTTCGCGGGCTTCGAACCC,CCCTTTATAATGCGAGGGTC,TCTCGCTAATCTCCGCCCAC,GGTTCCCAAAGCAGAGGGCG,AGCTAGAGTGCTCGGCTGCC,GCGCGCGTAGTTAATTCATG | 25 | chr9:107489778:-,chr3:181711719:+,chr9:107489882:-,chr3:181711828:+,chr9:107490086:+,chr9:107489882:-,chr8:127736037:+,chr1:26410614:+,chr1:26410514:+,chr1:26410351:+,chr9:107490137:-,chr4:60705483:-,chr8:127736037:+,chr6:96338314:+,chr8:127736014:+,chr1:84852332:+,chr8:127735970:+,chr8:18070268:-,chr6:31170765:+,chr8:127735889:+,chr22:20873854:-,chr6:31171306:-,chr8:127735841:+,chr9:107489727:-,chr6:31170866:- | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | p53 shRNA(+); 12 days after reprogramming; transfected with reprogramming factors; transfected with 36bp guide RNA |
ERS2006755 | case | Homo sapiens | OCT4,SOX2,KLF4,MYC,LIN28A,EEA-motif | RNA_seq | GGGGGAGAAACTGAGGCGA,GGCACAGTGCCAGAGGTCTG,TCTGTGGGGGACCTGCACTG,GTGGCTGGCAGGCTGGCTCT,CAAAACCCGGCAGCGAGGCT,GCTGCCATAGCAACGATGGA,CCCTTTATAATGCGAGGGTC,GTGTCAGAGACCGGAGTTGT,CGGGGTACTCAAGTCTTCTA,TAATTATCTGCCCGGGGGGT,CCCAGCACTTTGGG,AATCCCAGCACTTT,GCCTCCCAAAGTGC,GCTACTTGGGAGGC,GCCTCCCAAGTAGC,CGAACGTGTCTGCGGGCGCG,TATAAGTAAGGAACGCGCGC,GCTGCCATAGCAACGATGGA,GTTCGGTCGCTGCGCGACCA,TCTTCGCGGGCTTCGAACCC,CCCTTTATAATGCGAGGGTC,TCTCGCTAATCTCCGCCCAC,GGTTCCCAAAGCAGAGGGCG,AGCTAGAGTGCTCGGCTGCC,GCGCGCGTAGTTAATTCATG | 25 | chr9:107489778:-,chr3:181711719:+,chr9:107489882:-,chr3:181711828:+,chr9:107490086:+,chr9:107489882:-,chr8:127736037:+,chr1:26410614:+,chr1:26410514:+,chr1:26410351:+,chr9:107490137:-,chr4:60705483:-,chr8:127736037:+,chr6:96338314:+,chr8:127736014:+,chr1:84852332:+,chr8:127735970:+,chr8:18070268:-,chr6:31170765:+,chr8:127735889:+,chr22:20873854:-,chr6:31171306:-,chr8:127735841:+,chr9:107489727:-,chr6:31170866:- | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | p53 shRNA(+); 12 days after reprogramming; transfected with reprogramming factors; transfected with 36bp guide RNA |
ERS2006756 | case | Homo sapiens | OCT4,SOX2,KLF4,MYC,LIN28A,EEA-motif | RNA_seq | GGGGGAGAAACTGAGGCGA,GGCACAGTGCCAGAGGTCTG,TCTGTGGGGGACCTGCACTG,GTGGCTGGCAGGCTGGCTCT,CAAAACCCGGCAGCGAGGCT,GCTGCCATAGCAACGATGGA,CCCTTTATAATGCGAGGGTC,GTGTCAGAGACCGGAGTTGT,CGGGGTACTCAAGTCTTCTA,TAATTATCTGCCCGGGGGGT,CCCAGCACTTTGGG,AATCCCAGCACTTT,GCCTCCCAAAGTGC,GCTACTTGGGAGGC,GCCTCCCAAGTAGC,CGAACGTGTCTGCGGGCGCG,TATAAGTAAGGAACGCGCGC,GCTGCCATAGCAACGATGGA,GTTCGGTCGCTGCGCGACCA,TCTTCGCGGGCTTCGAACCC,CCCTTTATAATGCGAGGGTC,TCTCGCTAATCTCCGCCCAC,GGTTCCCAAAGCAGAGGGCG,AGCTAGAGTGCTCGGCTGCC,GCGCGCGTAGTTAATTCATG | 25 | chr9:107489778:-,chr3:181711719:+,chr9:107489882:-,chr3:181711828:+,chr9:107490086:+,chr9:107489882:-,chr8:127736037:+,chr1:26410614:+,chr1:26410514:+,chr1:26410351:+,chr9:107490137:-,chr4:60705483:-,chr8:127736037:+,chr6:96338314:+,chr8:127736014:+,chr1:84852332:+,chr8:127735970:+,chr8:18070268:-,chr6:31170765:+,chr8:127735889:+,chr22:20873854:-,chr6:31171306:-,chr8:127735841:+,chr9:107489727:-,chr6:31170866:- | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | p53 shRNA(+); 12 days after reprogramming; transfected with reprogramming factors; transfected with 36bp guide RNA |
ERS2006757 | case | Homo sapiens | OCT4,SOX2,KLF4,MYC,LIN28A,EEA-motif | RNA_seq | GGGGGAGAAACTGAGGCGA,GGCACAGTGCCAGAGGTCTG,TCTGTGGGGGACCTGCACTG,GTGGCTGGCAGGCTGGCTCT,CAAAACCCGGCAGCGAGGCT,GCTGCCATAGCAACGATGGA,CCCTTTATAATGCGAGGGTC,GTGTCAGAGACCGGAGTTGT,CGGGGTACTCAAGTCTTCTA,TAATTATCTGCCCGGGGGGT,CCCAGCACTTTGGG,AATCCCAGCACTTT,GCCTCCCAAAGTGC,GCTACTTGGGAGGC,GCCTCCCAAGTAGC,CGAACGTGTCTGCGGGCGCG,TATAAGTAAGGAACGCGCGC,GCTGCCATAGCAACGATGGA,GTTCGGTCGCTGCGCGACCA,TCTTCGCGGGCTTCGAACCC,CCCTTTATAATGCGAGGGTC,TCTCGCTAATCTCCGCCCAC,GGTTCCCAAAGCAGAGGGCG,AGCTAGAGTGCTCGGCTGCC,GCGCGCGTAGTTAATTCATG | 25 | chr9:107489778:-,chr3:181711719:+,chr9:107489882:-,chr3:181711828:+,chr9:107490086:+,chr9:107489882:-,chr8:127736037:+,chr1:26410614:+,chr1:26410514:+,chr1:26410351:+,chr9:107490137:-,chr4:60705483:-,chr8:127736037:+,chr6:96338314:+,chr8:127736014:+,chr1:84852332:+,chr8:127735970:+,chr8:18070268:-,chr6:31170765:+,chr8:127735889:+,chr22:20873854:-,chr6:31171306:-,chr8:127735841:+,chr9:107489727:-,chr6:31170866:- | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | p53 shRNA(+); 12 days after reprogramming; transfected with reprogramming factors; transfected with 36bp guide RNA |
ERS2006750 | control | Homo sapiens | NA | RNA_seq | NA | 0 | NA | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | |
ERS2006751 | control | Homo sapiens | NA | RNA_seq | NA | 0 | NA | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | |
ERS2006752 | control | Homo sapiens | NA | RNA_seq | NA | 0 | NA | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | |
ERS2006753 | control | Homo sapiens | NA | RNA_seq | NA | 0 | NA | 29980666 | E-MTAB-6186 | CCD-1112Sk | cell line | |