Details for DataSet_20


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM1838417caseHomo sapiensHS2RNA_seqaatatgtcacattctgtctc1chr11:5280570:+26501517GSE71557K562cell line
GSM1838418caseHomo sapiensHS2RNA_seqaatatgtcacattctgtctc1chr11:5280570:+26501517GSE71557K562cell line
GSM1838419caseHomo sapiensHS2RNA_seqaatatgtcacattctgtctc1chr11:5280570:+26501517GSE71557K562cell line
GSM1838420controlHomo sapiensNARNA_seqNA0NA26501517GSE71557K562cell line
GSM1838421controlHomo sapiensNARNA_seqNA0NA26501517GSE71557K562cell line
GSM1838422controlHomo sapiensNARNA_seqNA0NA26501517GSE71557K562cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes