Details for DataSet_221

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
GSM3515106caseHomo sapiensHER2ChIP_seq_H3K9me3GAATTTATCCCGGACTCCGGGG,GTTGGAATGCAGTTGGAGGGGG,ATTCCAGAAGATATGCCCCGGG3chr17:39699761:+,chr17:39699942:+,chr17:39699548:+31053162GSE123882HCT116cell line
GSM3515107caseHomo sapiensHER2ChIP_seq_H3K9me3GAATTTATCCCGGACTCCGGGG,GTTGGAATGCAGTTGGAGGGGG,ATTCCAGAAGATATGCCCCGGG3chr17:39699761:+,chr17:39699942:+,chr17:39699548:+31053162GSE123882HCT116cell line
GSM3515104controlHomo sapiensHER2ChIP_seq_H3K9me3GAATTTATCCCGGACTCCGGGG,GTTGGAATGCAGTTGGAGGGGG,ATTCCAGAAGATATGCCCCGGG3chr17:39699761:+,chr17:39699942:+,chr17:39699548:+31053162GSE123882HCT116cell line
GSM3515105controlHomo sapiensHER2ChIP_seq_H3K9me3GAATTTATCCCGGACTCCGGGG,GTTGGAATGCAGTTGGAGGGGG,ATTCCAGAAGATATGCCCCGGG3chr17:39699761:+,chr17:39699942:+,chr17:39699548:+31053162GSE123882HCT116cell line

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Differential binding sites and off-target assessment

  Differential binding sites

  Off-target assessment

  Signal density at the binding sites

GSM3515106
GSM3515107
GSM3515104
GSM3515105