Details for DataSet_223
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SAMN10025419 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA490128 | ES-derived neural progenitor cells | tissue | Sox1-,sorted |
| SAMN10025421 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA490128 | ES-derived neural progenitor cells | tissue | Sox1-,sorted |
| SAMN10025415 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA490128 | ES-derived neural progenitor cells | tissue | Sox1-,sorted |
| SAMN10025417 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA490128 | ES-derived neural progenitor cells | tissue | Sox1-,sorted |
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Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
