Details for DataSet_225


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
SAMN10025430caseMus musculusSox1Bisulfite_seqGTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG2chr8:12445288:+,chr8:12445475:-31073172PRJNA490128ES-derived neural progenitor cellstissueSox1+,DNMT inhibition
SAMN10025431caseMus musculusSox1Bisulfite_seqGTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG2chr8:12445288:+,chr8:12445475:-31073172PRJNA490128ES-derived neural progenitor cellstissueSox1+,DNMT inhibition
SAMN10025432caseMus musculusSox1Bisulfite_seqGTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG2chr8:12445288:+,chr8:12445475:-31073172PRJNA490128ES-derived neural progenitor cellstissueSox1+,DNMT inhibition
SAMN10025422controlMus musculusNABisulfite_seqNA0NA31073172PRJNA490128ES-derived neural progenitor cellstissueSox1-
SAMN10025424controlMus musculusNABisulfite_seqNA0NA31073172PRJNA490128ES-derived neural progenitor cellstissueSox1-
SAMN10025425controlMus musculusNABisulfite_seqNA0NA31073172PRJNA490128ES-derived neural progenitor cellstissueSox1-

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Differentially methylated regions and off-target assessment

  Differentially methylated regions

  Off-target assessment

  Methylation profile

SAMN10025430
SAMN10025431
SAMN10025432
SAMN10025422
SAMN10025424
SAMN10025425