Details for DataSet_228
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SAMN10952813 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952814 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952815 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952816 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952809 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952810 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952811 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
| SAMN10952812 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA522700 | mESCs | tissue | unsorted |
JBrowse
Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
