Details for DataSet_231
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SAMN10952829 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA522700 | mESCs | tissue | Sox1+,sorted |
| SAMN10952831 | case | Mus musculus | Sox1 | Bisulfite_seq | GTTAATCATTCGGAGCGCGC,GCGCGGGCGGCGGAGCAAGG | 2 | chr8:12445288:+,chr8:12445475:- | 31073172 | PRJNA522700 | mESCs | tissue | Sox1+,sorted |
| SAMN10952825 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA522700 | mESCs | tissue | Sox1+,sorted |
| SAMN10952827 | control | Mus musculus | NA | Bisulfite_seq | NA | 0 | NA | 31073172 | PRJNA522700 | mESCs | tissue | Sox1+,sorted |
JBrowse
Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
