Details for DataSet_241
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM3452798 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452799 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452804 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452805 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452810 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452811 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452816 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452817 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452822 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452823 | case | Homo sapiens | PDGFRA | Bisulfite_seq | GTGAGCTGAATTGTGCCTGG | 1 | chr4:53930133:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452802 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452803 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452808 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452809 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452814 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452815 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452820 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452821 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452826 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452827 | control | Homo sapiens | NA | Bisulfite_seq | NA | 0 | NA | 31534142 | GSE121998 | HEK293 | cell line |
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Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
