Details for DataSet_242
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|
Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM3452800 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452801 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452806 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452807 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452812 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452813 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452818 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452819 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452824 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line | |
| GSM3452825 | case | Homo sapiens | PDGFRA | Bisulfite_seq | TGAGCTGAATTGTGCCTGG,CACAGATAATGCAGCTAGA | 2 | chr4:53930134:+,chr4:53930168:+ | 31534142 | GSE121998 | HEK293 | cell line |
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Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
