Details for DataSet_246
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM3151933 | case | Homo sapiens | IL1RN | ChIP_seq_FLAG | GTGCTCTGGAAGGAGGGGCAGCTCCACCCTTC | 1 | chr2:113117878:+ | 31548729 | GSE114859 | HEK293T | cell line | |
| GSM3151934 | case | Homo sapiens | IL1RN | ChIP_seq_FLAG | GTGCTCTGGAAGGAGGGGCAGCTCCACCCTTC | 1 | chr2:113117878:+ | 31548729 | GSE114859 | HEK293T | cell line | |
| GSM3151935 | case | Homo sapiens | IL1RN | ChIP_seq_FLAG | GTGCTCTGGAAGGAGGGGCAGCTCCACCCTTC | 1 | chr2:113117878:+ | 31548729 | GSE114859 | HEK293T | cell line | |
| GSM3151936 | control | Homo sapiens | IL1RN | ChIP_seq_FLAG | GTGCTCTGGAAGGAGGGGCAGCTCCACCCTTC | 1 | chr2:113117878:+ | 31548729 | GSE114859 | HEK293T | cell line | |
| GSM3151937 | control | Homo sapiens | IL1RN | ChIP_seq_FLAG | GTGCTCTGGAAGGAGGGGCAGCTCCACCCTTC | 1 | chr2:113117878:+ | 31548729 | GSE114859 | HEK293T | cell line | |
| GSM3151938 | control | Homo sapiens | IL1RN | ChIP_seq_FLAG | GTGCTCTGGAAGGAGGGGCAGCTCCACCCTTC | 1 | chr2:113117878:+ | 31548729 | GSE114859 | HEK293T | cell line |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
