Details for DataSet_275
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM3854113 | case | Homo sapiens | HS2 | ChIP_seq_CTCF | GGCCCTGTAAGCATCCTGCTG | 1 | chr11:5280667:+ | 31980609 | GSE132216 | K562 | cell line | |
| GSM3854114 | case | Homo sapiens | HS2 | ChIP_seq_CTCF | GGCCCTGTAAGCATCCTGCTG | 1 | chr11:5280667:+ | 31980609 | GSE132216 | K562 | cell line | |
| GSM3854129 | control | Homo sapiens | Gal4 | ChIP_seq_CTCF | GAACGACTAGTTAGGCGTGTA | 1 | NA | 31980609 | GSE132216 | K562 | cell line | |
| GSM3854130 | control | Homo sapiens | Gal4 | ChIP_seq_CTCF | GAACGACTAGTTAGGCGTGTA | 1 | NA | 31980609 | GSE132216 | K562 | cell line |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
