Details for DataSet_305


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM5123390caseHomo sapiensCD151RNA_seqCCGGACTCGGACGCGTGGT,TGTCCAGGGACAATGAGCA,GACAATGAGCAGGGTGTCC3chr11:833006:+,chr11:833363:-,chr11:833355:-33838111GSE168012HEK293Tcell line
GSM5123391caseHomo sapiensCD151RNA_seqCCGGACTCGGACGCGTGGT,TGTCCAGGGACAATGAGCA,GACAATGAGCAGGGTGTCC3chr11:833006:+,chr11:833363:-,chr11:833355:-33838111GSE168012HEK293Tcell line
GSM5123398controlHomo sapiensNARNA_seqNA0NA33838111GSE168012HEK293Tcell line
GSM5123399controlHomo sapiensNARNA_seqNA0NA33838111GSE168012HEK293Tcell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes