Details for DataSet_314
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM5123424 | case | Homo sapiens | DYNC2LI1 | Bisulfite_seq | GCCGAGAATGAGATGTAAA,CGCGGTTGCGTGGGGAGAC,GTGGGGAGACGGGCATCAT,GTCGCGGCCGCGGTTGCGT,GGGAGCGACGTCGCGGCCG | 5 | chr2:43774001:-,chr2:43774010:-,chr2:43773940:+,chr2:43773993:-,chr2:43773984:- | 33838111 | GSE168012 | HEK293T | cell line | |
| GSM5123425 | case | Homo sapiens | DYNC2LI1 | Bisulfite_seq | GCCGAGAATGAGATGTAAA,CGCGGTTGCGTGGGGAGAC,GTGGGGAGACGGGCATCAT,GTCGCGGCCGCGGTTGCGT,GGGAGCGACGTCGCGGCCG | 5 | chr2:43774001:-,chr2:43774010:-,chr2:43773940:+,chr2:43773993:-,chr2:43773984:- | 33838111 | GSE168012 | HEK293T | cell line | |
| GSM5123422 | control | Homo sapiens | NA | Bisulfite_seq | NA | 1 | NA | 33838111 | GSE168012 | HEK293T | cell line | |
| GSM5123423 | control | Homo sapiens | NA | Bisulfite_seq | NA | 1 | NA | 33838111 | GSE168012 | HEK293T | cell line |
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Differentially methylated regions and off-target assessment
Differentially methylated regions
Off-target assessment
Methylation profile
