Details for DataSet_318
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM4407727 | case | Mus musculus | Pdx1 | ChIP_seq_Cas9 | CAAGCCGGCCGCCGTGCCAT | 1 | chr5:147206878:- | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407728 | case | Mus musculus | Pdx1 | ChIP_seq_Cas9 | CAAGCCGGCCGCCGTGCCAT | 1 | chr5:147206878:- | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407729 | case | Mus musculus | Pdx1 | ChIP_seq_Cas9 | CAAGCCGGCCGCCGTGCCAT | 1 | chr5:147206878:- | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407730 | case | Mus musculus | Pdx1 | ChIP_seq_Cas9 | CAAGCCGGCCGCCGTGCCAT | 1 | chr5:147206878:- | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407723 | control | Mus musculus | NA | ChIP_seq_Cas9 | NA | 0 | NA | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407724 | control | Mus musculus | NA | ChIP_seq_Cas9 | NA | 0 | NA | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407725 | control | Mus musculus | NA | ChIP_seq_Cas9 | NA | 0 | NA | 34341582 | GSE146843 | Liver | tissue | |
| GSM4407726 | control | Mus musculus | NA | ChIP_seq_Cas9 | NA | 0 | NA | 34341582 | GSE146843 | Liver | tissue |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
