Details for DataSet_32


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM2241608caseMus musculusMstn,FstRNA_seqGTCAAGCCCAAAGTCTCTCCGGGACCTCTT,GGAATCCCGGTGCTGCCGCTACCCCCTCA,GGTTCTTATTTGCGT,GGAAATCAAAGCGGC4chr10:14446538:+,chr1:53105446:-,chr1:53105493:+,chrX:10356295:+27595405GSE84534Lymph nodestissue
GSM2241609caseMus musculusMstn,FstRNA_seqGTCAAGCCCAAAGTCTCTCCGGGACCTCTT,GGAATCCCGGTGCTGCCGCTACCCCCTCA,GGTTCTTATTTGCGT,GGAAATCAAAGCGGC4chr10:14446538:+,chr1:53105446:-,chr1:53105493:+,chrX:10356295:+27595405GSE84534Lymph nodestissue
GSM2241610caseMus musculusMstn,FstRNA_seqGTCAAGCCCAAAGTCTCTCCGGGACCTCTT,GGAATCCCGGTGCTGCCGCTACCCCCTCA,GGTTCTTATTTGCGT,GGAAATCAAAGCGGC4chr10:14446538:+,chr1:53105446:-,chr1:53105493:+,chrX:10356295:+27595405GSE84534Lymph nodestissue
GSM2241605controlMus musculusNARNA_seqNA0NA27595405GSE84534Lymph nodestissue
GSM2241606controlMus musculusNARNA_seqNA0NA27595405GSE84534Lymph nodestissue
GSM2241607controlMus musculusNARNA_seqNA0NA27595405GSE84534Lymph nodestissue

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes