Details for DataSet_345


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
ERS1470170caseHomo sapiensSLC25A25-AS1RNA_seqGATGGAGAATGTAAGGGTAC1chr9:128118725:+29860520E-MTAB-5308HeLacell lineclone
ERS1470184caseHomo sapiensSLC25A25-AS1RNA_seqGATGGAGAATGTAAGGGTAC1chr9:128118725:+29860520E-MTAB-5308HeLacell lineclone
ERS1470189caseHomo sapiensSLC25A25-AS1RNA_seqGATGGAGAATGTAAGGGTAC1chr9:128118725:+29860520E-MTAB-5308HeLacell lineclone
ERS1470192caseHomo sapiensSLC25A25-AS1RNA_seqGATGGAGAATGTAAGGGTAC1chr9:128118725:+29860520E-MTAB-5308HeLacell lineclone
ERS1470201controlHomo sapiensNARNA_seqGCGCCAAACGTGCCCTGACGG1NA29860520E-MTAB-5308HeLacell lineclone
ERS1470206controlHomo sapiensNARNA_seqGCGCCAAACGTGCCCTGACGG1NA29860520E-MTAB-5308HeLacell lineclone
ERS1470208controlHomo sapiensNARNA_seqGCGCCAAACGTGCCCTGACGG1NA29860520E-MTAB-5308HeLacell lineclone
ERS1470221controlHomo sapiensNARNA_seqGCGCCAAACGTGCCCTGACGG1NA29860520E-MTAB-5308HeLacell lineclone

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes