Details for DataSet_354


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM2326221caseHomo sapienseHDAC6RNA_seqGTATAGCCCGGTAGGAAATGG1chrX:48800738:+27708057GSE87257K562cell line
GSM2326222caseHomo sapienseHDAC6RNA_seqGTATAGCCCGGTAGGAAATGG1chrX:48800738:+27708057GSE87257K562cell line
GSM2326223caseHomo sapienseHDAC6RNA_seqGTATAGCCCGGTAGGAAATGG1chrX:48800738:+27708057GSE87257K562cell line
GSM2326215controlHomo sapiensNARNA_seqGGAGAGGCCCCTGTCGCGT1NA27708057GSE87257K562cell line
GSM2326216controlHomo sapiensNARNA_seqGGAGAGGCCCCTGTCGCGT1NA27708057GSE87257K562cell line
GSM2326217controlHomo sapiensNARNA_seqGGAGAGGCCCCTGTCGCGT1NA27708057GSE87257K562cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes