Details for DataSet_355
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM2572571 | case | Homo sapiens | PVT1 | ChIP_seq_HA | GCCTCCGGGCAGAGCGCGTG | 1 | chr8:127794531:+ | 29731168 | GSE97584 | MDA-MB-231 | cell line | |
| GSM2572572 | case | Homo sapiens | PVT1 | ChIP_seq_HA | GCCTCCGGGCAGAGCGCGTG | 1 | chr8:127794531:+ | 29731168 | GSE97584 | MDA-MB-231 | cell line | |
| GSM2572569 | control | Homo sapiens | NA | ChIP_seq_HA | GTGCTGCAAGGCGATTAAGT | 1 | NA | 29731168 | GSE97584 | MDA-MB-231 | cell line | |
| GSM2572570 | control | Homo sapiens | NA | ChIP_seq_HA | GTGCTGCAAGGCGATTAAGT | 1 | NA | 29731168 | GSE97584 | MDA-MB-231 | cell line |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
