Details for DataSet_358
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM2572579 | case | Homo sapiens | PVT1 | ChIP_seq_H3K9me3 | GCCGGGCAGAGCGCGTGTGG | 1 | chr8:127794534:+ | 29731168 | GSE97584 | MDA-MB-231 | cell line | |
| GSM2572580 | case | Homo sapiens | PVT1 | ChIP_seq_H3K9me3 | GCCGGGCAGAGCGCGTGTGG | 1 | chr8:127794534:+ | 29731168 | GSE97584 | MDA-MB-231 | cell line | |
| GSM2572575 | control | Homo sapiens | NA | ChIP_seq_H3K9me3 | GTGCTGCAAGGCGATTAAGT | 1 | NA | 29731168 | GSE97584 | MDA-MB-231 | cell line | |
| GSM2572576 | control | Homo sapiens | NA | ChIP_seq_H3K9me3 | GTGCTGCAAGGCGATTAAGT | 1 | NA | 29731168 | GSE97584 | MDA-MB-231 | cell line |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
