Details for DataSet_372

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM3315878caseRattus norvegicusBdnfIVRNA_seqCACTAGAGTGTCTATTTCG1NC_086021.1:116637775:+30863790GSE117961Hippocampal neuroncell line
GSM3315879caseRattus norvegicusBdnfIVRNA_seqCACTAGAGTGTCTATTTCG1NC_086021.1:116637775:+30863790GSE117961Hippocampal neuroncell line
GSM3315880caseRattus norvegicusBdnfIVRNA_seqCACTAGAGTGTCTATTTCG1NC_086021.1:116637775:+30863790GSE117961Hippocampal neuroncell line
GSM3315872controlRattus norvegicusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA30863790GSE117961Hippocampal neuroncell line
GSM3315873controlRattus norvegicusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA30863790GSE117961Hippocampal neuroncell line
GSM3315874controlRattus norvegicusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA30863790GSE117961Hippocampal neuroncell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes