Details for DataSet_377

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM3486970caseMus musculusRLTR13D6RNA_seqTAGAGACAGTGAAACTAATT,TATTGTTAAACCCACCACCA,GTGAAGAAACCTGTCTCAGG,GGAATGTATACATCAAAAGA4chr3:88189249:-,chr8:56145407:+,chrX:127949367:-,chr9:76309275:+31012843GSE122856mESCscell line
GSM3486971caseMus musculusRLTR13D6RNA_seqTAGAGACAGTGAAACTAATT,TATTGTTAAACCCACCACCA,GTGAAGAAACCTGTCTCAGG,GGAATGTATACATCAAAAGA4chr3:88189249:-,chr8:56145407:+,chrX:127949367:-,chr9:76309275:+31012843GSE122856mESCscell line
GSM3486972caseMus musculusRLTR13D6RNA_seqTAGAGACAGTGAAACTAATT,TATTGTTAAACCCACCACCA,GTGAAGAAACCTGTCTCAGG,GGAATGTATACATCAAAAGA4chr3:88189249:-,chr8:56145407:+,chrX:127949367:-,chr9:76309275:+31012843GSE122856mESCscell line
GSM3486967controlMus musculusNARNA_seqNA0NA31012843GSE122856mESCscell line
GSM3486968controlMus musculusNARNA_seqNA0NA31012843GSE122856mESCscell line
GSM3486969controlMus musculusNARNA_seqNA0NA31012843GSE122856mESCscell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes