Details for DataSet_378

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM3486973caseMus musculusRLTR13D6RNA_seqAGTGAAGAAACCTGTCTCAG,CTAGTGAAGAAACCTGTCTC,GTGAAGAAACCTGTCTCAGG,CTGAGACAGGTTTCTTCACT4chr10:37910327:-,chr3:10224509:+,chr3:83779310:+,chr10:37910328:+31012843GSE122856mESCscell line
GSM3486974caseMus musculusRLTR13D6RNA_seqAGTGAAGAAACCTGTCTCAG,CTAGTGAAGAAACCTGTCTC,GTGAAGAAACCTGTCTCAGG,CTGAGACAGGTTTCTTCACT4chr10:37910327:-,chr3:10224509:+,chr3:83779310:+,chr10:37910328:+31012843GSE122856mESCscell line
GSM3486975caseMus musculusRLTR13D6RNA_seqAGTGAAGAAACCTGTCTCAG,CTAGTGAAGAAACCTGTCTC,GTGAAGAAACCTGTCTCAGG,CTGAGACAGGTTTCTTCACT4chr10:37910327:-,chr3:10224509:+,chr3:83779310:+,chr10:37910328:+31012843GSE122856mESCscell line
GSM3486967controlMus musculusNARNA_seqNA0NA31012843GSE122856mESCscell line
GSM3486968controlMus musculusNARNA_seqNA0NA31012843GSE122856mESCscell line
GSM3486969controlMus musculusNARNA_seqNA0NA31012843GSE122856mESCscell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes