Details for DataSet_383

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
GSM3521321caseHomo sapiensLTR5HSChIP_seq_H3K4me3TACTAAGGGAACTCAG,AAAACCGCCTTAGGGC,AAAACTGCCTTAGGGC,AGCCCGACACCCGTAA,AGGAGAAAACCACCTT,TACCATCTCGGAGAGG,AACCTTGGACAATACC,TAAAGGGTCTGTGCTG,GACATTCCATTGCCCA,ATAGAGAAAGAAAAGT,GAAACGCCCACAGGTG,AAGCTTTCTTGCTTAG12chr19:51906098:+,chr1:225227012:-,chr20:60041371:+,chr1:25588178:-,chrY:4634472:+,chr17:43355457:-,chr15:51936608:-,chr8:39650817:-,chr7:15159569:-,chr12:58327613:-,chr7:141751701:+,chr1:227868722:-30070637GSE111337NCCITcell line
GSM3521316controlHomo sapiensNAChIP_seq_H3K4me3CGGAGTAACAAGCGGACGGA,CGAGTGTTATACGCACCGTT,CAACGGGTTCTCCCGGCTAC,CAGGAGTCGCCGATACGCGT,TTCACGTCGTCTCGCGACCA,GTGTCGGATTCCGCCGCTTA,CACGAACTCACACCGCGCGA,CGCTAGTACGCTCCTCTATA,TCGCGCTTGGGTTATACGCT,CTATCTCGAGTGGTAATGCG,AATCGACTCGAACTTCGTGT,CCCGATGGACTATACCGAAC12NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA30070637GSE111337NCCITcell line

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Differential binding sites and off-target assessment

  Differential binding sites

  Off-target assessment

  Signal density at the binding sites

GSM3521321
GSM3521316