Details for DataSet_385

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
GSM3521324caseHomo sapiensLTR5HSChIP_seq_H3K27acTACTAAGGGAACTCAG,AAAACCGCCTTAGGGC,AAAACTGCCTTAGGGC,AGCCCGACACCCGTAA,AGGAGAAAACCACCTT,TACCATCTCGGAGAGG,AACCTTGGACAATACC,TAAAGGGTCTGTGCTG,GACATTCCATTGCCCA,ATAGAGAAAGAAAAGT,GAAACGCCCACAGGTG,AAGCTTTCTTGCTTAG12chr2:112934660:+,chr1:46789112:+,chr18:31811260:-,chr11:56719013:-,chr1:155635412:-,chr1:89067305:+,chr5:93456674:+,chr11:62381953:-,chr8:17907854:+,chr12:4721386:-,chr19:28131202:+,chr16:35955937:-30070637GSE111337NCCITcell line
GSM3521314controlHomo sapiensNAChIP_seq_H3K27acCGGAGTAACAAGCGGACGGA,CGAGTGTTATACGCACCGTT,CAACGGGTTCTCCCGGCTAC,CAGGAGTCGCCGATACGCGT,TTCACGTCGTCTCGCGACCA,GTGTCGGATTCCGCCGCTTA,CACGAACTCACACCGCGCGA,CGCTAGTACGCTCCTCTATA,TCGCGCTTGGGTTATACGCT,CTATCTCGAGTGGTAATGCG,AATCGACTCGAACTTCGTGT,CCCGATGGACTATACCGAAC12NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA30070637GSE111337NCCITcell line

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Differential binding sites and off-target assessment

  Differential binding sites

  Off-target assessment

  Signal density at the binding sites

GSM3521324
GSM3521314