Details for DataSet_387

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_accession Cell_type Sample_Type Notes
GSM3521326caseHomo sapiensLTR5HSChIP_seq_H3K4me3TACTAAGGGAACTCAG,AAAACCGCCTTAGGGC,AAAACTGCCTTAGGGC,AGCCCGACACCCGTAA,AGGAGAAAACCACCTT,TACCATCTCGGAGAGG,AACCTTGGACAATACC,TAAAGGGTCTGTGCTG,GACATTCCATTGCCCA,ATAGAGAAAGAAAAGT,GAAACGCCCACAGGTG,AAGCTTTCTTGCTTAG12chr19:52421504:-,chr19:51869271:+,chrX:154911092:-,chr12:56822467:-,chr22:11556437:-,chr16:5754830:+,chr22:18514789:-,chr18:68942292:-,chr7:15159569:-,chr1:73129452:-,chr6:77725789:-,chr13:24956931:-30070637GSE111337NCCITcell line
GSM3521316controlHomo sapiensNAChIP_seq_H3K4me3CGGAGTAACAAGCGGACGGA,CGAGTGTTATACGCACCGTT,CAACGGGTTCTCCCGGCTAC,CAGGAGTCGCCGATACGCGT,TTCACGTCGTCTCGCGACCA,GTGTCGGATTCCGCCGCTTA,CACGAACTCACACCGCGCGA,CGCTAGTACGCTCCTCTATA,TCGCGCTTGGGTTATACGCT,CTATCTCGAGTGGTAATGCG,AATCGACTCGAACTTCGTGT,CCCGATGGACTATACCGAAC12NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA30070637GSE111337NCCITcell line

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Differential binding sites and off-target assessment

  Differential binding sites

  Off-target assessment

  Signal density at the binding sites

GSM3521326
GSM3521316