Details for DataSet_395

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM3911851caseMus musculusKcna1RNA_seqAGTCAATGATCACATCCTCC1chr6:126622875:+32129831GSE133930epileptic hippocampustissue
GSM3911852caseMus musculusKcna1RNA_seqAGTCAATGATCACATCCTCC1chr6:126622875:+32129831GSE133930epileptic hippocampustissue
GSM3911853caseMus musculusKcna1RNA_seqAGTCAATGATCACATCCTCC1chr6:126622875:+32129831GSE133930epileptic hippocampustissue
GSM3911854caseMus musculusKcna1RNA_seqAGTCAATGATCACATCCTCC1chr6:126622875:+32129831GSE133930epileptic hippocampustissue
GSM3911855caseMus musculusKcna1RNA_seqAGTCAATGATCACATCCTCC1chr6:126622875:+32129831GSE133930epileptic hippocampustissue
GSM3911856caseMus musculusKcna1RNA_seqAGTCAATGATCACATCCTCC1chr6:126622875:+32129831GSE133930epileptic hippocampustissue
GSM3911845controlMus musculusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA32129831GSE133930epileptic hippocampustissue
GSM3911846controlMus musculusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA32129831GSE133930epileptic hippocampustissue
GSM3911847controlMus musculusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA32129831GSE133930epileptic hippocampustissue
GSM3911848controlMus musculusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA32129831GSE133930epileptic hippocampustissue
GSM3911849controlMus musculusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA32129831GSE133930epileptic hippocampustissue
GSM3911850controlMus musculusLacZRNA_seqTGCGAATACGCCCACGCGAT1NA32129831GSE133930epileptic hippocampustissue

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes