Details for DataSet_422

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM4822392caseHomo sapiensZFP36L1;NEUROG3RNA_seqATGACAACAAGAACCCCGGA,CTCGAGAGAGCAAACAGAG2chr14:68793483:-,chr10:69573614:-33264623GSE159194iPSCcell line
GSM4822395caseHomo sapiensZFP36L1;NEUROG3RNA_seqATGACAACAAGAACCCCGGA,CTCGAGAGAGCAAACAGAG2chr14:68793483:-,chr10:69573614:-33264623GSE159194iPSCcell line
GSM4822397caseHomo sapiensZFP36L1;NEUROG3RNA_seqATGACAACAAGAACCCCGGA,CTCGAGAGAGCAAACAGAG2chr14:68793483:-,chr10:69573614:-33264623GSE159194iPSCcell line
GSM4822378controlHomo sapiensNA;NEUROG3RNA_seqTCATCAAGGAGCATTCCGT,CTCGAGAGAGCAAACAGAG2NA,chr10:69573614:-33264623GSE159194iPSCcell line
GSM4822380controlHomo sapiensNA;NEUROG3RNA_seqTCATCAAGGAGCATTCCGT,CTCGAGAGAGCAAACAGAG2NA,chr10:69573614:-33264623GSE159194iPSCcell line
GSM4822383controlHomo sapiensNA;NEUROG3RNA_seqTCATCAAGGAGCATTCCGT,CTCGAGAGAGCAAACAGAG2NA,chr10:69573614:-33264623GSE159194iPSCcell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes