Details for DataSet_437
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type |
|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM5387840 | case | Homo sapiens | KIF4A | ATAC_seq | GTACGCACCTGAGGCTCTCC,GGGCCCAGGGAGAACGGGGA | 2 | chrX:70290567:-,chr21:43702265:+ | 34326322 | GSE178330 | LNCaP | cell line |
| GSM5387841 | case | Homo sapiens | KIF4A | ATAC_seq | GTACGCACCTGAGGCTCTCC,GGGCCCAGGGAGAACGGGGA | 2 | chrX:70290567:-,chr21:43702265:+ | 34326322 | GSE178330 | LNCaP | cell line |
| GSM5387842 | control | Homo sapiens | NA | ATAC_seq | GAACGACTAGTTAGGCGTGTA | 1 | NA | 34326322 | GSE178330 | LNCaP | cell line |
| GSM5387843 | control | Homo sapiens | NA | ATAC_seq | GAACGACTAGTTAGGCGTGTA | 1 | NA | 34326322 | GSE178330 | LNCaP | cell line |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
