Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
---|---|---|---|---|---|---|---|---|---|---|---|---|
GSM5769486 | case | Homo sapiens | SVA | ChIP_seq_YY1 | CTCCCTAATCTCAAGTACCC,TGTTTCAGAGAGCACGGGGT | 2 | chr17:1246694:-,chr22:38409691:+ | 35704668 | GSE192951 | NCCIT | cell line | |
GSM5769499 | case | Homo sapiens | SVA | ChIP_seq_YY1 | CTCCCTAATCTCAAGTACCC,TGTTTCAGAGAGCACGGGGT | 2 | chr17:1246694:-,chr22:38409691:+ | 35704668 | GSE192951 | NCCIT | cell line | |
GSM5769488 | control | Homo sapiens | SVA | ChIP_seq_YY1 | CTCCCTAATCTCAAGTACCC,TGTTTCAGAGAGCACGGGGT | 2 | chr17:1246694:-,chr22:38409691:+ | 35704668 | GSE192951 | NCCIT | cell line | |
GSM5769500 | control | Homo sapiens | SVA | ChIP_seq_YY1 | CTCCCTAATCTCAAGTACCC,TGTTTCAGAGAGCACGGGGT | 2 | chr17:1246694:-,chr22:38409691:+ | 35704668 | GSE192951 | NCCIT | cell line |
Differential binding sites
Off-target assessment
Signal density at the binding sites