Details for DataSet_471

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM5965230caseHomo sapiensACTR5RNA_seqGACTGGGTCCGGTGCGGCAC,GGGCACGGGCGTCGCGGAAC,GGACGCGCGCTCCAAGATGG,GTCCAGCACTGGGTCCGGTG4chr20:38748519:-,chr20:38748513:-,chr20:38748499:-,chr20:38748463:+36563143GSE199143HepG2cell line
GSM5965231caseHomo sapiensACTR5RNA_seqGACTGGGTCCGGTGCGGCAC,GGGCACGGGCGTCGCGGAAC,GGACGCGCGCTCCAAGATGG,GTCCAGCACTGGGTCCGGTG4chr20:38748519:-,chr20:38748513:-,chr20:38748499:-,chr20:38748463:+36563143GSE199143HepG2cell line
GSM5965232controlHomo sapiensNARNA_seqGATTCTAAAACGGATTACCA,GGATGATAACTGGTCCGCAG2NA,NA36563143GSE199143HepG2cell line
GSM5965233controlHomo sapiensNARNA_seqGATTCTAAAACGGATTACCA,GGATGATAACTGGTCCGCAG2NA,NA36563143GSE199143HepG2cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes