Details for DataSet_472

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM5965234caseHomo sapiensACTR5RNA_seqGACTGGGTCCGGTGCGGCAC,GGGCACGGGCGTCGCGGAAC,GGACGCGCGCTCCAAGATGG,GTCCAGCACTGGGTCCGGTG4chr1:9395703:+,chr20:38748513:-,chr20:38748499:-,chr20:38748463:+36563143GSE199143U87cell line
GSM5965235caseHomo sapiensACTR5RNA_seqGACTGGGTCCGGTGCGGCAC,GGGCACGGGCGTCGCGGAAC,GGACGCGCGCTCCAAGATGG,GTCCAGCACTGGGTCCGGTG4chr1:9395703:+,chr20:38748513:-,chr20:38748499:-,chr20:38748463:+36563143GSE199143U87cell line
GSM5965236controlHomo sapiensNARNA_seqGATTCTAAAACGGATTACCA,GGATGATAACTGGTCCGCAG2NA,NA36563143GSE199143U87cell line
GSM5965237controlHomo sapiensNARNA_seqGATTCTAAAACGGATTACCA,GGATGATAACTGGTCCGCAG2NA,NA36563143GSE199143U87cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes