Details for DataSet_473
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type |
|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM5974829 | case | Homo sapiens | PRRX2 | ATAC_seq | GCGAGGTTTGCTTCAAGAAG | 1 | chr9:129665607:+ | 35405009 | GSE199539 | LNCaP | cell line |
| GSM5974830 | case | Homo sapiens | PRRX2 | ATAC_seq | GCGAGGTTTGCTTCAAGAAG | 1 | chr9:129665607:+ | 35405009 | GSE199539 | LNCaP | cell line |
| GSM5974827 | control | Homo sapiens | NC | ATAC_seq | TAAACAAAAAGGAAATAGTT | 1 | chr9:122544022:- | 35405009 | GSE199539 | LNCaP | cell line |
| GSM5974828 | control | Homo sapiens | NC | ATAC_seq | TAAACAAAAAGGAAATAGTT | 1 | chr9:122544022:- | 35405009 | GSE199539 | LNCaP | cell line |
JBrowse
Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
