Details for DataSet_474

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM5974834caseHomo sapiensPRRX2RNA_seqGCGAGGTTTGCTTCAAGAAG1chr9:129665607:+35405009GSE199539LNCaPcell line
GSM5974835caseHomo sapiensPRRX2RNA_seqGCGAGGTTTGCTTCAAGAAG1chr9:129665607:+35405009GSE199539LNCaPcell line
GSM5974836caseHomo sapiensPRRX2RNA_seqGCGAGGTTTGCTTCAAGAAG1chr9:129665607:+35405009GSE199539LNCaPcell line
GSM5974831controlHomo sapiensNCRNA_seqTAAACAAAAAGGAAATAGTT1chr12:55272843:+35405009GSE199539LNCaPcell line
GSM5974832controlHomo sapiensNCRNA_seqTAAACAAAAAGGAAATAGTT1chr12:55272843:+35405009GSE199539LNCaPcell line
GSM5974833controlHomo sapiensNCRNA_seqTAAACAAAAAGGAAATAGTT1chr12:55272843:+35405009GSE199539LNCaPcell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes