Details for DataSet_483

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM6260963caseHomo sapiensPURPLRNA_seqGGAATTCATGCCTTGCAAAG1chr5:27472237:+36342127GSE206698SKHEP1cell lineDMSO treatment
GSM6260969caseHomo sapiensPURPLRNA_seqGGAATTCATGCCTTGCAAAG1chr5:27472237:+36342127GSE206698SKHEP1cell lineDMSO treatment
GSM6260960controlHomo sapiensNARNA_seqCCGGCGCCGAGCCGGACTTCG1chr3:9363218:+36342127GSE206698SKHEP1cell lineDMSO treatment
GSM6260961controlHomo sapiensNARNA_seqAGTCGCTTCTCGATTATGGG1chr3:9396264:-36342127GSE206698SKHEP1cell lineDMSO treatment
GSM6260966controlHomo sapiensNARNA_seqCCGGCGCCGAGCCGGACTTCG1chr3:9363218:+36342127GSE206698SKHEP1cell lineDMSO treatment
GSM6260967controlHomo sapiensNARNA_seqAGTCGCTTCTCGATTATGGG1chr3:9396264:-36342127GSE206698SKHEP1cell lineDMSO treatment

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes