Details for DataSet_489
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_source | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM6260977 | case | Homo sapiens | PURPL | RNA_seq | GACCTGGGAATCAATGTGTG | 1 | chr5:27472289:+ | 36342127 | GSE206698 | SKHEP1 | cell line | Nutlin-3a treatment |
| GSM6260983 | case | Homo sapiens | PURPL | RNA_seq | GACCTGGGAATCAATGTGTG | 1 | chr5:27472289:+ | 36342127 | GSE206698 | SKHEP1 | cell line | Nutlin-3a treatment |
| GSM6260972 | control | Homo sapiens | NA | RNA_seq | CCGGCGCCGAGCCGGACTTCG | 1 | chr3:9363218:+ | 36342127 | GSE206698 | SKHEP1 | cell line | Nutlin-3a treatment |
| GSM6260973 | control | Homo sapiens | NA | RNA_seq | AGTCGCTTCTCGATTATGGG | 1 | chr3:9396264:- | 36342127 | GSE206698 | SKHEP1 | cell line | Nutlin-3a treatment |
| GSM6260978 | control | Homo sapiens | NA | RNA_seq | CCGGCGCCGAGCCGGACTTCG | 1 | chr3:9363218:+ | 36342127 | GSE206698 | SKHEP1 | cell line | Nutlin-3a treatment |
| GSM6260979 | control | Homo sapiens | NA | RNA_seq | AGTCGCTTCTCGATTATGGG | 1 | chr3:9396264:- | 36342127 | GSE206698 | SKHEP1 | cell line | Nutlin-3a treatment |
Gene expression profile
Scatter diagram of differential expression
Heatmap of unsupervised hierarchical clustering
