Details for DataSet_509
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_accession | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM6427518 | case | Homo sapiens | ZEB1 | ChIP_seq_H3K4me3 | GGGCGGTTTGCGGCAACCGT,AGAGGCTCTCGCTCTACGGC,CACCTGGTTTACGACACTCC,AGCATTTAGACACAAGCGAG | 4 | chr10:31319209:+,chr10:31319025:-,chr10:31319067:-,chr10:31319117:- | 37217832 | GSE210277 | SUM159 | cell line | |
| GSM6427519 | case | Homo sapiens | ZEB1 | ChIP_seq_H3K4me3 | GGGCGGTTTGCGGCAACCGT,AGAGGCTCTCGCTCTACGGC,CACCTGGTTTACGACACTCC,AGCATTTAGACACAAGCGAG | 4 | chr10:31319209:+,chr10:31319025:-,chr10:31319067:-,chr10:31319117:- | 37217832 | GSE210277 | SUM159 | cell line | |
| GSM6427520 | control | Homo sapiens | NA | ChIP_seq_H3K4me3 | NA | 0 | NA | 37217832 | GSE210277 | SUM159 | cell line | |
| GSM6427521 | control | Homo sapiens | NA | ChIP_seq_H3K4me3 | NA | 0 | NA | 37217832 | GSE210277 | SUM159 | cell line |
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Differential binding sites and off-target assessment
Differential binding sites
Off-target assessment
Signal density at the binding sites
