Details for DataSet_511

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM6552469caseMus musculusMERVLRNA_seqCCGAGGTAACAAGGGCCAGG,AGAAAGGCTACATTAGATCG,ACAAGGGTAACTGTACACTG3chr7:17379101:-,chr3:6977103:+,chr5:7577842:+36864102GSE1965202-cell stage embryoembryo
GSM6552470caseMus musculusMERVLRNA_seqCCGAGGTAACAAGGGCCAGG,AGAAAGGCTACATTAGATCG,ACAAGGGTAACTGTACACTG3chr7:17379101:-,chr3:6977103:+,chr5:7577842:+36864102GSE1965202-cell stage embryoembryo
GSM6552467controlMus musculusGFPRNA_seqGAGATGTTCGTGTACCGCG1NA36864102GSE1965202-cell stage embryoembryo
GSM6552468controlMus musculusGFPRNA_seqGAGATGTTCGTGTACCGCG1NA36864102GSE1965202-cell stage embryoembryo

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes