Details for DataSet_535

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114277caseHomo sapienschr17-45903110RNA_seqGCCTGGATTTAGCAGTAGGG,ATATCCTTGCTATCCCAGGG,CTAATATCCTTGCTATCCCA,AATGCCAAGAACGAAGTGCT,GGACAAATTCATGGAACCGT,AAATTCATGGAACCGTGGGA,AACGCTGGCTCCAATTCAGG7chr17:45903135:+,chr17:45903160:+,chr17:45903164:+,chr17:45903221:-,chr17:45902871:-,chr17:45903062:-,chr17:45903065:-38232730GSE228121BC1cell line
GSM7114303caseHomo sapienschr17-45903110RNA_seqGCCTGGATTTAGCAGTAGGG,ATATCCTTGCTATCCCAGGG,CTAATATCCTTGCTATCCCA,AATGCCAAGAACGAAGTGCT,GGACAAATTCATGGAACCGT,AAATTCATGGAACCGTGGGA,AACGCTGGCTCCAATTCAGG7chr17:45903135:+,chr17:45903160:+,chr17:45903164:+,chr17:45903221:-,chr17:45902871:-,chr17:45903062:-,chr17:45903065:-38232730GSE228121BC1cell line
GSM7114294controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114305controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114321controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114325controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114326controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114345controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes