Details for DataSet_541

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114283caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114306caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114315caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114378caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114398caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114402caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114457caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114467caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114519caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114573caseHomo sapienschr17-45894000RNA_seqTAAGCCGATTTGTTAAGGAA,GTTAAGGAAAGGATTCACCT2chr17:45893936:+,chr17:45893947:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes