Details for DataSet_544

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114287caseHomo sapienschr17-45903110RNA_seqGCCTGGATTTAGCAGTAGGG,ATATCCTTGCTATCCCAGGG,CTAATATCCTTGCTATCCCA,AATGCCAAGAACGAAGTGCT,GGACAAATTCATGGAACCGT,AAATTCATGGAACCGTGGGA,AACGCTGGCTCCAATTCAGG7chr17:45903135:+,chr17:45903160:+,chr17:45903164:+,chr17:45903221:-,chr17:45902871:-,chr17:45903062:-,chr17:45903065:-38232730GSE228121XCL4cell line
GSM7114319caseHomo sapienschr17-45903110RNA_seqGCCTGGATTTAGCAGTAGGG,ATATCCTTGCTATCCCAGGG,CTAATATCCTTGCTATCCCA,AATGCCAAGAACGAAGTGCT,GGACAAATTCATGGAACCGT,AAATTCATGGAACCGTGGGA,AACGCTGGCTCCAATTCAGG7chr17:45903135:+,chr17:45903160:+,chr17:45903164:+,chr17:45903221:-,chr17:45902871:-,chr17:45903062:-,chr17:45903065:-38232730GSE228121XCL4cell line
GSM7114479caseHomo sapienschr17-45903110RNA_seqGCCTGGATTTAGCAGTAGGG,ATATCCTTGCTATCCCAGGG,CTAATATCCTTGCTATCCCA,AATGCCAAGAACGAAGTGCT,GGACAAATTCATGGAACCGT,AAATTCATGGAACCGTGGGA,AACGCTGGCTCCAATTCAGG7chr17:45903135:+,chr17:45903160:+,chr17:45903164:+,chr17:45903221:-,chr17:45902871:-,chr17:45903062:-,chr17:45903065:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes