Details for DataSet_549
Sample info of the DataSet
| Sample_accession | Sample_group | Organism | Target_gene | Data_type | sgRNA | sgRNA_Number_perVector | sgRNA_coordinate | PubMed | Data_source | Cell_type | Sample_Type | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GSM7114301 | case | Homo sapiens | chr17-45873822 | RNA_seq | TGGCTGTACAGAGAATTTAG,TCTCTGCGTTCATTCCTATG,TTCCTGACGCTCCTCCACAT | 3 | chr17:45873582:-,chr17:45873910:+,chr17:45873927:- | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114349 | case | Homo sapiens | chr17-45873822 | RNA_seq | TGGCTGTACAGAGAATTTAG,TCTCTGCGTTCATTCCTATG,TTCCTGACGCTCCTCCACAT | 3 | chr17:45873582:-,chr17:45873910:+,chr17:45873927:- | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114294 | control | Homo sapiens | GFP | RNA_seq | NA | 1 | NA | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114305 | control | Homo sapiens | GFP | RNA_seq | NA | 1 | NA | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114321 | control | Homo sapiens | GFP | RNA_seq | NA | 1 | NA | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114325 | control | Homo sapiens | GFP | RNA_seq | NA | 1 | NA | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114326 | control | Homo sapiens | GFP | RNA_seq | NA | 1 | NA | 38232730 | GSE228121 | BC1 | cell line | |
| GSM7114345 | control | Homo sapiens | GFP | RNA_seq | NA | 1 | NA | 38232730 | GSE228121 | BC1 | cell line |
Gene expression profile
Scatter diagram of differential expression
Heatmap of unsupervised hierarchical clustering
