Details for DataSet_550

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114310caseHomo sapienschr17-45861418RNA_seqTGCTGAGCTAATGTTCAGGA,CATTAGCTCAGCAACAATGA,GACTGCTATACATGGGCCCA,GAATTGAGGACAGAGCGTCA4chr17:45861544:+,chr17:45861394:-,chr17:45861401:+,chr17:45861494:+38232730GSE228121XCL4cell line
GSM7114513caseHomo sapienschr17-45861418RNA_seqTGCTGAGCTAATGTTCAGGA,CATTAGCTCAGCAACAATGA,GACTGCTATACATGGGCCCA,GAATTGAGGACAGAGCGTCA4chr17:45861544:+,chr17:45861394:-,chr17:45861401:+,chr17:45861494:+38232730GSE228121XCL4cell line
GSM7114536caseHomo sapienschr17-45861418RNA_seqTGCTGAGCTAATGTTCAGGA,CATTAGCTCAGCAACAATGA,GACTGCTATACATGGGCCCA,GAATTGAGGACAGAGCGTCA4chr17:45861544:+,chr17:45861394:-,chr17:45861401:+,chr17:45861494:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes