Details for DataSet_557

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114329caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121BC1cell line
GSM7114330caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121BC1cell line
GSM7114336caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121BC1cell line
GSM7114350caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121BC1cell line
GSM7114294controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114305controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114321controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114325controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114326controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line
GSM7114345controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121BC1cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes