Details for DataSet_561


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114335caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114353caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114359caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114376caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114388caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114389caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114430caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114431caseHomo sapienschr17-44988418RNA_seqTTAATTAGAGACTCCCACGG,GGGCCTAATGAGTCCCCAAG,TTTCTTTGTCTCTCCGCACG,AAATCAATTAGCCACTTACG4chr17:44988454:+,chr17:44988251:-,chr17:44988286:-,chr17:44988357:+38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes