Details for DataSet_568

Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114354caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114362caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114368caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114396caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114438caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114608caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114627caseHomo sapienschr17-45787210RNA_seqCCACAATATAGGCCCCAGAG,AGACATTGTCTCTATCCCCA,CCACACTCCATCTCCCTACG,TCCTGTTAGAATCCATCCAG4chr17:45787407:-,chr17:45787105:-,chr17:45787262:+,chr17:45787338:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes