Details for DataSet_569


Sample info of the DataSet

Sample_accession Sample_group Organism Target_gene Data_type sgRNA sgRNA_Number_perVector sgRNA_coordinate PubMed Data_source Cell_type Sample_Type Notes
GSM7114355caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114397caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114399caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114439caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114441caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114628caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114629caseHomo sapienschr17-45813425RNA_seqTCCCTTCTAACTCCACTCCG,gggCGTGGCCAAAGGCACAA,GAGAGGCTGCAAGAACGGGG,GTGCATCCTTAGGAGCTGCG4chr17:45813532:+,chr17:45813252:+,chr17:45813284:-,chr17:45813408:-38232730GSE228121XCL4cell line
GSM7114331controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line
GSM7114360controlHomo sapiensGFPRNA_seqNA1NA38232730GSE228121XCL4cell line

Gene expression profile

       

Scatter diagram of differential expression

Heatmap of unsupervised hierarchical clustering

Heatmap image


Function Enrichment Analysis of differentially expressed genes & Gene Set Enrichment Analysis (GSEA) of all expressed genes